Information for 4-TARCAAATATTKA (Motif 2)

C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
Reverse Opposite:
A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C A G T T C A G A G T C G A C T G C T A
p-value:1e-34
log p-value:-7.897e+01
Information Content per bp:1.723
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.91%
Number of Background Sequences with motif208.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets54.9 +/- 23.4bp
Average Position of motif in Background51.2 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.89
Offset:3
Orientation:forward strand
Alignment:TARCAAATATTKA----
---CTAATATTGCTAAA
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.89
Offset:3
Orientation:forward strand
Alignment:TARCAAATATTKA----
---CTAATATTGCTAAA
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TARCAAATATTKA
----AATTATT--
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TARCAAATATTKA
TATGTAAATAT---
 A C G T C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:TARCAAATATTKA----
------ATATTTACATA
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TARCAAATATTKA-
----GAATATTCAT
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TARCAAATATTKA
WAAGTAAAYA----
 A C G T C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TARCAAATATTKA
AAACAAACATTC-
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TARCAAATATTKA-----
-NAAANTTATTGAANCAN
 C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TARCAAATATTKA
TAAGTAAACAAA--
 A C G T C G A T C T G A T C A G A G T C G T C A C G T A C G T A A C G T C G T A A C G T A C G T A C T G T C G A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T