Information for 6-GATCAAACAGAAC (Motif 3)

T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
Reverse Opposite:
T A C G C G A T A C G T A G T C A C G T A T C G A C G T A C G T A C G T A T C G G C T A A C G T A T G C
p-value:1e-18
log p-value:-4.167e+01
Information Content per bp:1.777
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.8 +/- 23.4bp
Average Position of motif in Background45.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0083.1_Tcf7_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GATCAAACAGAAC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GATCAAACAGAAC
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GATCAAACAGAAC
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GATCAAACAGAAC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GATCAAACAGAAC
AAAGATCAAAGGGTT-
 A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GATCAAACAGAAC
AAAGATCAAAGGAA--
 A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATCAAACAGAAC
ACATCAAAGGNA--
 A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GATCAAACAGAAC
-ATTAAA------
 T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GATCAAACAGAAC
CCATCAATCAAA--
 A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATCAAACAGAAC
AAAGATCAAAGG----
 A C G T A C G T A C G T T A C G C G T A C G A T A T G C C G T A T C G A C G T A A T G C C G T A C T A G C G T A C G T A A G T C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T