p-value: | 1e-10 |
log p-value: | -2.315e+01 |
Information Content per bp: | 1.841 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 1.67% |
Number of Background Sequences with motif | 62.3 |
Percentage of Background Sequences with motif | 0.13% |
Average Position of motif in Targets | 42.9 +/- 22.3bp |
Average Position of motif in Background | 48.0 +/- 31.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.76 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT-- ----TGACCTYA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT ----TGACCT |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT---- ----TGACCTTGAT |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT- ---GTGACCTT |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 5 |
Score: | 0.72 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT-- ----TGACCYCT |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTATTGACCT--- ---NTGACCTTGA |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 7 |
Score: | 0.71 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT--- ---ATGACCTTGA |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT--- --NATGACCTTGA |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT------ NNNNTGACCTTTNNNN |
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FOXB1/MA0845.1/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTATTGACCT- ATATTTACATA |
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