Information for 9-GYGCCACCCA (Motif 8)

A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A G C T A C T G A C T G A G T C C T G A A G T C
p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.908
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif71.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.8 +/- 19.6bp
Average Position of motif in Background50.1 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GYGCCACCCA--
GGACCACCCACG
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GYGCCACCCA
GCCCCACCCA
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GYGCCACCCA
GCCACACCCA
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GYGCCACCCA
GCCMCRCCCH
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GYGCCACCCA---
NRGCCCCRCCCHBNN
 A C G T A C G T A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GYGCCACCCA---
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GYGCCACCCA
GCCCCGCCCC
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GYGCCACCCA-
GGCCACRCCCMK
 A C G T A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GYGCCACCCA
GGCCACACCCA
 A C G T A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GYGCCACCCA--
GCTCCGCCCMCY
 A C T G A G C T A C T G G T A C A G T C C T G A A G T C A G T C A G T C C G T A A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T