Information for 15-CGTGCAGACG (Motif 18)

A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C T G
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.2 +/- 17.4bp
Average Position of motif in Background53.5 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CGTGCAGACG---
---CCAGACRSVB
 A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGTGCAGACG-
---CCAGACAG
 A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTGCAGACG----
NNTTTGCACACGGCCC
 A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGACG
RTACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGACG
GGACGTGC-----
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTGCAGACG----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTGCAGACG
TACGTGCV----
 A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGCAGACG
GGGTACGTGC-----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTGCAGACG---
-NCGCGGACGTTG
 A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTGCAGACG
CGTCTAGACA
 A G T C A C T G A C G T A C T G G T A C C G T A A C T G C G T A A G T C A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A