Information for 11-CAACAAAGAC (Motif 12)

A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
Reverse Opposite:
A C T G C G A T A T G C A C G T A G C T A C G T A T C G A G C T A C G T A T C G
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.854
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets52.8 +/- 30.3bp
Average Position of motif in Background47.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGAC---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGAC
GGAACAAAGR-
 A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGAC---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGAC
VRRACAAWGG-
 A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAACAAAGAC
--ACAAAG--
 A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAACAAAGAC-
ACATCAAAGGNA
 A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAACAAAGAC
-AACAAT---
 A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAACAAAGAC
-RACAAWGG-
 A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAACAAAGAC-
AAAGATCAAAGGAA
 A C G T A C G T A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGAC
AAAACAAAGG-
 A C G T A T G C C G T A T C G A A T G C C G T A C T G A C G T A A T C G C G T A G T A C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T