Information for 6-GCMAATAKTG (Motif 5)

T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
Reverse Opposite:
G A T C C T G A G T C A A C G T C G T A C A G T A G C T C A T G T C A G A T G C
p-value:1e-22
log p-value:-5.137e+01
Information Content per bp:1.536
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif207.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets49.8 +/- 23.5bp
Average Position of motif in Background47.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GCMAATAKTG-----
-CTAATATTGCTAAA
 T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GCMAATAKTG-----
-CTAATATTGCTAAA
 T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GCMAATAKTG
WAAGTAAAYA---
 A C G T A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCMAATAKTG
TATGTAAATAT--
 A C G T A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCMAATAKTG
TATGTAAATAT--
 A C G T A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCMAATAKTG
NCWRWGTAAACANSV
 A C G T A C G T A C G T A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCMAATAKTG
TAAGTAAACAAA-
 A C G T A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCMAATAKTG
GTAAACA---
 T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCMAATAKTG
GTAAACA---
 T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCMAATAKTG
AAATAAACA---
 A C G T A C G T T A C G A G T C G T A C T C G A G T C A G C A T T G C A C A G T G A C T C T A G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T