Information for 16-GYGTCTGCGG (Motif 26)

A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G
Reverse Opposite:
A G T C G T A C A T C G A G T C T G C A C A T G T G C A T G A C C T G A G T A C
p-value:1e-4
log p-value:-1.033e+01
Information Content per bp:1.683
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif1600.1
Percentage of Background Sequences with motif3.40%
Average Position of motif in Targets45.0 +/- 26.4bp
Average Position of motif in Background50.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GYGTCTGCGG---
---TTTGCGGTTT
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GYGTCTGCGG---
--GTCTGTGGTTT
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GYGTCTGCGG---
----TTGCGGTTT
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GYGTCTGCGG---
---TATGCGGGTA
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GYGTCTGCGG
VBSYGTCTGG--
 A C G T A C G T A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GYGTCTGCGG---
-TGTCAGGGGGCG
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GYGTCTGCGG----
--NNHTGTGGTTWN
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GYGTCTGCGG--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GYGTCTGCGG------
NNNNATGCGGGTNNNN
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GYGTCTGCGG----
----CTGTGGTTTN
 A C T G G A C T A C T G A C G T G T A C A C G T A C T G T A G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G