Information for 19-AAAGAGATGGCTG (Motif 21)

T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C G T A C C G T A A G C T G T A C A G C T A G T C A C G T A G C T A G C T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.6 +/- 14.4bp
Average Position of motif in Background45.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:AAAGAGATGGCTG
--------NGCTN
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:9
Orientation:forward strand
Alignment:AAAGAGATGGCTG--
---------GCTGTG
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAAGAGATGGCTG--
--NGNGACAGCTGCN
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAAGAGATGGCTG
-AACAGATGGC--
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AAAGAGATGGCTG-
------TWGTCTGV
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAAGAGATGGCTG--
AGAGRRACAGCWGAC
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAAGAGATGGCTG---
----AAAATGCTGACT
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAAGAGATGGCTG--
----AATTTGCTGAC
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAGAGATGGCTG-
--CAAGATGGCGGC
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

POL002.1_INR/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AAAGAGATGGCTG-
------NNNANTGA
 T C G A C T G A C G T A A C T G C T G A A C T G C T G A G A C T A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A