Information for 17-ACAMACTGAWCAA (Motif 18)

C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G A T A C G T T A G C C T G A A C T G A C G T A C G T A C G T A C T G A G C T
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets27.9 +/- 11.9bp
Average Position of motif in Background41.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAMACTGAWCAA----
ACCGGTTGATCACCTGA
 C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACAMACTGAWCAA
AAGAACATWHTGTTC--
 A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACAMACTGAWCAA
VAGRACAKWCTGTYC--
 A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACAMACTGAWCAA-
TGACCCAGTGACCTAC
 A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAMACTGAWCAA
VAGRACAKNCTGTBC--
 A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAMACTGAWCAA------
--TCACGGAACAATAGGTG
 C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:ACAMACTGAWCAA-
--------AACAAT
 C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACAMACTGAWCAA
NAGAACAGNCTGTNCT-
 A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACAMACTGAWCAA------
--NNNNNGAACAATTGANN
 C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACAMACTGAWCAA
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C G T A A G T C A G C T A C T G C G T A C G T A G T A C G T C A C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T