Information for 5-YCACASGAACMTGACC (Motif 16)

A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C
Reverse Opposite:
A T C G C T A G A C G T A G T C C G T A A C T G A T C G C A G T A G C T A G T C A T C G A G C T A C T G C G A T C T A G C T A G
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.2 +/- 16.1bp
Average Position of motif in Background61.9 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.59
Offset:9
Orientation:forward strand
Alignment:YCACASGAACMTGACC
---------CATGAC-
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.58
Offset:11
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-
-----------TGACCT
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.57
Offset:11
Orientation:reverse strand
Alignment:YCACASGAACMTGACC---
-----------TGACCYCT
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-
-----TGACCTTGACCT
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-
-----GWAAYHTGABMC
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-
-----TGACCTTGACCT
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:YCACASGAACMTGACC
--------NCGTGACN
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-----
-----------TGACCTTGAT
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:YCACASGAACMTGACC---
-----------TGACCTYA
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:YCACASGAACMTGACC-------
-------NNNNTGACCCGGCGCG
 A G T C A G T C G C T A A G T C C T G A A T G C A C T G C T G A G T C A A T G C G T A C A C G T A C T G C G T A A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G