Information for 12-KTCTCTTTTTTCT (Motif 13)

A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
Reverse Opposite:
C T G A T A C G C T G A C G T A T C G A C T G A T G C A G C T A A T C G C G T A T A C G C T G A T G A C
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.629
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.4 +/- 27.7bp
Average Position of motif in Background35.0 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:KTCTCTTTTTTCT----
---TTTTTTTTCNNGTN
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:KTCTCTTTTTTCT
---YCTTTGTTCC
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KTCTCTTTTTTCT
GKMTCADRTTWC-
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KTCTCTTTTTTCT----
-ANTCCTTTGTCTNNNN
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:KTCTCTTTTTTCT
GKVTCADRTTWC-
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

GATA3/MA0037.2/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:KTCTCTTTTTTCT
-----TCTTATCT
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KTCTCTTTTTTCT--
AACCCTTTGATCTTT
 A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---KTCTCTTTTTTCT
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KTCTCTTTTTTCT---
NNNTCCTTTGTTCTNNN
 A C G T A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-KTCTCTTTTTTCT---
TNNTCCTTTGTTCTNNT
 A C G T A C T G G A C T A T G C C G A T T A G C C G A T A C G T A G C T A G C T G C A T A G C T A G T C G A C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T