Information for 9-CVGGCAGAACCTT (Motif 10)

A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A C T G C G A T A G C T A G T C A G C T A C T G A G T C G T A C A C T G A C T G
p-value:1e-13
log p-value:-3.049e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 19.7bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CVGGCAGAACCTT
-GGGCGGGACC--
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CVGGCAGAACCTT-
-------AAGCTTG
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CVGGCAGAACCTT
TNNGGGCAG------
 A C G T A C G T A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CVGGCAGAACCTT--
ADGGYAGYAGCATCT
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CVGGCAGAACCTT
TGCCTGCGYCMCCTT
 A C G T A C G T A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CVGGCAGAACCTT---
NNGGCGACACCTCNNN
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CVGGCAGAACCTT------
NNTTCTGGAANNTTCTAGAA
 A C G T A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CVGGCAGAACCTT
CWGGCGGGAA---
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CVGGCAGAACCTT
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CVGGCAGAACCTT----
-------AACCTTATAT
 A G T C T G A C A C T G A C T G G T A C C T G A A C T G C T G A C G T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T