Information for 4-CGGGACCGCCCCG (Motif 5)

A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G
Reverse Opposite:
A G T C A C T G A C T G A T C G A C T G A G T C A C T G A T C G C A G T A G T C A G T C A T G C A C T G
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.904
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.1 +/- 18.2bp
Average Position of motif in Background53.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGGGACCGCCCCG
-GGCCCCGCCCCC
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGGACCGCCCCG----
-ATCCCCGCCCCTAAAA
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGGGACCGCCCCG-
NAGCCCCGCCCCCN
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGGACCGCCCCG
-GGTCCCGCCC--
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGGACCGCCCCG-----
-GGTCCCGCCCCCTTCTC
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGGACCGCCCCG
-GGCCACRCCCMK
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGACCGCCCCG--
TTGGGGGCGCCCCTAG
 A C G T A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGGACCGCCCCG----
--GCCCCGCCCCCTCCC
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGGACCGCCCCG-
--GGACCACCCACG
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGGACCGCCCCG----
TCACCCCGCCCCAAATT
 A G T C A T C G A C T G A C T G G C T A A T G C A G T C A C T G A G T C A T G C A G T C G T A C A C T G A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T