Information for 4-HGGAAGCGCGCCCGTG (Motif 7)

G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G
Reverse Opposite:
A T G C T G C A A T G C A C T G A C T G T C A G A T G C A T C G G T A C A C T G A G T C A C G T A G C T G T A C A G T C C A G T
p-value:1e-11
log p-value:-2.695e+01
Information Content per bp:1.775
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 21.5bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG
----AGCGCGCC----
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG-
-TGGCGCGCGCGCCTGA
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T
A C G T C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:HGGAAGCGCGCCCGTG-
--ANCGCGCGCCCTTNN
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T
A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:HGGAAGCGCGCCCGTG-
--NTCGCGCGCCTTNNN
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:HGGAAGCGCGCCCGTG
TGGCAGNCTGCCAG--
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-HGGAAGCGCGCCCGTG
TTGGCANNNTGCCAAG-
 A C G T G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG-
--GGGGCTYGKCTGGGA
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG--
-------GCGCCTGCGCA
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG-
-TTGGGGGCGCCCCTAG
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:HGGAAGCGCGCCCGTG---
-----ACATGCCCGGGCAT
 G T C A A C T G A C T G C T G A G T C A C T A G G T A C A C T G A T G C A T C G A G T C A G T C G T A C A T C G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T