Information for 2-GCTSTCCAAGGTGCTG (Motif 4)

A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
Reverse Opposite:
A T G C C G T A C T A G A T G C C G T A A G T C A T G C C A G T A G C T A C T G T A C G G T C A A T G C C G T A C T A G A G T C
p-value:1e-12
log p-value:-2.903e+01
Information Content per bp:1.834
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 25.8bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GCTSTCCAAGGTGCTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---GCTSTCCAAGGTGCTG-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
----TTCAAGGTCAT-
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG---
--TATTCAAGGTCATGCGA
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
----BTCAAGGTCA--
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
----NTCAAGGTCA--
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
-----TCAAGGTCAT-
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
-----TCAAGGTCATA
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTSTCCAAGGTGCTG
AGAGTCCAAAGTCCA-
 A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTCCAAGGTGCTG
NGCTN------------
 A C G T A C T G A G T C A C G T A T C G A C G T A G T C A G T C C T G A G C T A A T C G A C T G A C G T A T C G A G T C C G A T A T C G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T