Information for 10-CCGCTAGCSCCCCTAG (Motif 23)

A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
Reverse Opposite:
T A G C A C G T C T G A C T A G A C T G A C T G A T C G A T C G A T C G T G A C A C G T C G T A A C T G G T A C A C T G A C T G
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.742
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif58.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets46.2 +/- 24.7bp
Average Position of motif in Background50.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTAGCSCCCCTAG
CCCCCTTGGGCCCC---
 A C G T A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCGCTAGCSCCCCTAG---
----AAGCCCCCCAAAAAT
 A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CCGCTAGCSCCCCTAG
AAACCGCAA----------
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CCGCTAGCSCCCCTAG
------TTCCCCCTAC
 A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CCGCTAGCSCCCCTAG
--GCTCCGCCCMCY--
 A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CCGCTAGCSCCCCTAG
TACGCCCCGCCACTCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:7
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTAGCSCCCCTAG
NGCTGCGATATCGNCGC---
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CCGCTAGCSCCCCTAG
GCCCCGCCCCCTCCC----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CCGCTAGCSCCCCTAG
--GCCACRCCCACY--
 A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:CCGCTAGCSCCCCTAG
--GCCACGCCCACT--
 A G T C A G T C A C T G A G T C G A C T T G C A A C T G A T G C A T G C A T G C A G T C T G A C A G T C A G C T G T C A A C T G
A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T A C G T