Information for 6-TGACAAAATG (Motif 19)

C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
Reverse Opposite:
A G T C T C G A A G C T C A G T C A G T C A G T T C A G G C A T G A T C G T C A
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.689
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif6.18%
Number of Background Sequences with motif920.3
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets51.3 +/- 29.0bp
Average Position of motif in Background52.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TGACAAAATG-
ARGAGGMCAAAATGW
 A C G T A C G T A C G T A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGACAAAATG-----
---CAAGATGGCGGC
 C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGACAAAATG
RHTGWCAR----
 A C G T A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGACAAAATG
TTGACAG----
 A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACAAAATG----
CTCACACAATGGCGC
 A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGACAAAATG
ARNTGACA-----
 A C G T A C G T A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGACAAAATG-
ACCGTGACTAATTNN
 A C G T A C G T A C G T A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGACAAAATG
GGTGCCAAGT--
 A C G T A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGACAAAATG
TTGACAGG---
 A C G T C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGACAAAATG--
--ACCATATGGT
 C A G T C T A G C G T A A G T C G T C A G T C A G T C A T C G A A G C T T A C G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T