Information for 7-CAGCAACAGATAG (Motif 13)

A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G
Reverse Opposite:
A T G C A C G T C G T A A C G T A G T C C G A T A C T G A C G T A C G T A C T G A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 12.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGCAACAGATAG
SCCTAGCAACAG----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGCAACAGATAG--
GAGCAACAGGTGGTT
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGCAACAGATAG
ATGCAACAGGTGG
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCAACAGATAG-
--GRAASTGAAAST
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGCAACAGATAG-
--GAAAGTGAAAGT
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAACAGATAG
CCGCATAGCAACGGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGCAACAGATAG
----AACCGANA-
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGCAACAGATAG-
--GAAACTGAAACT
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGCAACAGATAG-
--GAAASYGAAASY
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGCAACAGATAG-
----AACAGATGGT
 A G T C C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A C G A T C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T