Information for 2-CTGGGGTTATAGC (Motif 3)

A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T C G T A A C G T C T G A C G T A A G T C A G T C A G T C A T G C C G T A A C T G
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.7 +/- 31.0bp
Average Position of motif in Background50.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTGGGGTTATAGC
GCTGTGGTTT----
 A C G T A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTTATAGC
CTGTGGTTTN---
 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGGGGTTATAGC
--AGGGTAACAGC
 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGTTATAGC
GTCTGTGGTTT----
 A C G T A C G T A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGTTATAGC-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGGTTATAGC
NNTGTGGTTT----
 A C G T A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGGGTTATAGC
ATGGGGTGAT---
 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTTATAGC
TTGCGGTTT----
 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGGGGTTATAGC
GTGGGGTGAT---
 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGTTATAGC
NNHTGTGGTTWN---
 A C G T A C G T A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T