p-value: | 1e-9 |
log p-value: | -2.152e+01 |
Information Content per bp: | 1.841 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 3.08% |
Number of Background Sequences with motif | 225.5 |
Percentage of Background Sequences with motif | 0.46% |
Average Position of motif in Targets | 47.9 +/- 24.9bp |
Average Position of motif in Background | 49.4 +/- 29.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGCTAAGCAG---- --CACAGCAGGGGG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGCTAAGCAG NCCGTTGCTANGNGN |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCTAAGCAG- -DCTCAGCAGG |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGCTAAGCAG------ -DCHCAGCAGGRGGCC |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTAAGCAG---- CCACACAGCAGGAGA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGCTAAGCAG NNCGTTGCTATGGNN |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -9 |
Orientation: | reverse strand |
Alignment: | ---------TGCTAAGCAG---- NTNNNNNGTTGCTANGGNNCANA |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCTAAGCAG TATGCWAATBAV |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCTAAGCAG WATGCAAATGAG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTAAGCAG---- CCACACAGCAGGAGA |
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