Information for 4-GCATGGCTGGAGG (Motif 6)

T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
Reverse Opposite:
A T G C A G T C A G C T A T G C G T A C C G T A C T A G A T G C A T G C C G T A A G C T A C T G A G T C
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.791
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif52.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets54.3 +/- 25.7bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCATGGCTGGAGG
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCATGGCTGGAGG
GTCATGCHTGRCTGS---
 A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCATGGCTGGAGG
--TWGTCTGV---
 T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCATGGCTGGAGG-
---GGGCGGGAAGG
 T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCATGGCTGGAGG
----NGCTN----
 T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCATGGCTGGAGG-
---GGGCGGGAAGG
 T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCATGGCTGGAGG--
NNTNNTGTCTGGNNTNG
 A C G T A C G T T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCATGGCTGGAGG
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCATGGCTGGAGG--
---TGTCAGGGGGCG
 T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCATGGCTGGAGG--
NAGANTGGCGGGGNGNA
 A C G T A C G T T C A G G T A C T C G A C G A T A T C G A T C G A G T C A C G T A C T G A T C G C T G A T A C G A T C G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A