Information for 2-GCCTTGGGCTCTT (Motif 4)

A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C T G A A C T G A G T C A G T C A T G C C G T A C G T A A C T G A C T G A T G C
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 11.4bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTGGGCTCTT
TGCCTGAGGCN---
 A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTGGGCTCTT
NGCCTNAGGCN---
 A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTGGGCTCTT
NGCCTGAGGCN---
 A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGGGCTCTT
NTNGCCTCAGGCNNN-
 A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCTTGGGCTCTT
ATTGCCTCAGGCAAT-
 A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTTGGGCTCTT
SCCTSAGGSCAW-
 A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGGGCTCTT
NTCGCCTCAGGCAAT-
 A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCTTGGGCTCTT
-GCTCGGSCTC--
 A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCTTGGGCTCTT
ATGCCCTGAGGC----
 A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGGGCTCTT
GCTGACCTTGAACTN--
 A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A T C G A C T G A C T G A G T C A G C T A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T