Information for 4-AGTTCCCACA (Motif 16)

C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C T A G A C T G C G T A C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.3 +/- 25.1bp
Average Position of motif in Background46.0 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGTTCCCACA
HTTTCCCASG
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGTTCCCACA---
-NWAACCACADNN
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGTTCCCACA--
--TTMACACCTT
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTTCCCACA--
--TTGCAACATN
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTTCCCACA
ATTTTCCATT
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTTCCCACA--
--AAACCACAGC
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTTCCCACA---
--AAACCACAGAN
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTCCCACA
ATTTTCCATT
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTCCCACA-
ATTTCCAAGAA
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTTCCCACA-
-ATTAACACCT
 C G T A C T A G A C G T A C G T G T A C A G T C A G T C C G T A A G T C C G T A A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T