Information for 7-GAGTAGCAAC (Motif 20)

C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C
Reverse Opposite:
A T C G C G A T A C G T T A C G A G T C A G C T G C T A A T G C C A G T G T A C
p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.696
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif782.1
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets50.9 +/- 24.9bp
Average Position of motif in Background51.5 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGTAGCAAC---
CCGCATAGCAACGGA
 A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTAGCAAC-
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GAGTAGCAAC-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGTAGCAAC
NATGTTGCAA-
 A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGTAGCAAC---
TACCATAGCAACGGT
 A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTAGCAAC-
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAGTAGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GAGTAGCAAC-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGTAGCAAC--
SCCTAGCAACAG
 C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGTAGCAAC--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T C A T G G T C A T A C G C G A T T C G A A C T G A T G C T G C A C G T A T A G C A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G