p-value: | 1e-6 |
log p-value: | -1.562e+01 |
Information Content per bp: | 1.682 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 2.56% |
Number of Background Sequences with motif | 187.4 |
Percentage of Background Sequences with motif | 0.39% |
Average Position of motif in Targets | 53.5 +/- 25.8bp |
Average Position of motif in Background | 50.6 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.7 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCCTGGATGRACA GTCATGCHTGRCTGS--- |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCTGGATGRACA AGGCCTAG------- |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCTGGATGRACA AGGCCTNG------- |
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SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCTGGATGRACA------ NNCCTGNAAAAAAAAAAAAA |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCTGGATGRACA TGCCCNGGGGCA-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCCTGGATGRACA GGTCTGGCAT---- |
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SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCCTGGATGRACA------ NNCCTGNAAAAAAAAAAAAA |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GCCTGGATGRACA NGTCACGCTTGGCTGC--- |
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SPDEF/MA0686.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCTGGATGRACA ACCCGGATGTA-- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCCTGGATGRACA CTGTCTGG------- |
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