Information for 7-GTGGCTTCTGCCT (Motif 12)

A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C C G T A A C T G C G T A C G T A A C T G G T A C A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.139e+01
Information Content per bp:1.964
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 28.3bp
Average Position of motif in Background63.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGGCTTCTGCCT
---GCTTCC----
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGGCTTCTGCCT--
-TGACCTTTGCCCTA
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCTTCTGCCT-
AGATGCTRCTRCCHT
 A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCTTCTGCCT
TGTGGATTNNN---
 A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGGCTTCTGCCT---
-TGACCTTTGCCCTAN
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGCTTCTGCCT--
-TGACCTTTGCCCCA
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGGCTTCTGCCT-
GGGGCCGAGGCCTG
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGGCTTCTGCCT
TTGACTTTT----
 A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GTGGCTTCTGCCT
NNTGTGGATTSS----
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCTTCTGCCT--
CCNNACCATCTGGCCTN
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T