Information for 11-TTGGCCCTKAAGG (Motif 21)

A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
Reverse Opposite:
A G T C G A T C A G C T C G A T T G C A C T G A C T A G C T A G T A C G G T A C G T A C C T G A C T G A
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.696
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 22.5bp
Average Position of motif in Background55.8 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTGGCCCTKAAGG--
--TGCCCTGAGGGCA
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTGGCCCTKAAGG--
--TGCCCTGAGGGCA
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTGGCCCTKAAGG--
--TGCCCTGAGGGCA
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGGCCCTKAAGG
-ATGCCCTGAGGC
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGGCCCTKAAGG
-WTGSCCTSAGGS
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGGCCCTKAAGG
-TGACCTTGAN--
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCCTKAAGG
BNTGDCCTTG----
 A C G T A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCCTKAAGG
NTTGGCANN-----
 A C G T A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGGCCCTKAAGG
TTGGCA-------
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGCCCTKAAGG
-CTGCCCGCA---
 A G C T G A C T C A T G A C T G A T G C A G T C A G T C A G C T A C G T C G T A C T G A C A T G T C A G
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T