p-value: | 1e-4 |
log p-value: | -1.023e+01 |
Information Content per bp: | 1.903 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 4.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.2 +/- 16.0bp |
Average Position of motif in Background | 39.6 +/- 26.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT----- -TCACCCATCAATAAACA |
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PB0028.1_Hbp1_1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCATCCATCCAT--- NNCATTCATTCATNNN |
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EWSR1-FLI1/MA0149.1/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCCATCCATCCAT-- CCTTCCTTCCTTCCTTCC |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT GYCATCMATCAT- |
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PBX1/MA0070.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT -CCATCAATCAAA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCCATCCATCCAT--- -SCAGYCADGCATGAC |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT -TCATCAATCA-- |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT GCCATAAATCA-- |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCATCCATCCAT---- -GCAGCCAAGCGTGACN |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCCATCCATCCAT- GACCACATTCATACAAT |
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