Information for 1-CCSCAAACCCYGCTTT (Motif 2)

G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
Reverse Opposite:
C G T A T C G A C T G A A C T G T A G C C T G A C T A G A C T G A C T G A C G T A C G T A C G T C A T G A T G C T A C G A C T G
p-value:1e-14
log p-value:-3.306e+01
Information Content per bp:1.762
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 18.7bp
Average Position of motif in Background43.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCSCAAACCCYGCTTT
GGCCACACCCAN----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCSCAAACCCYGCTTT
GGCCACACCCA-----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCSCAAACCCYGCTTT
-GCCACACCCA-----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCSCAAACCCYGCTTT
GGACACACCCCC----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCSCAAACCCYGCTTT
-GCCMCRCCCH-----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCSCAAACCCYGCTTT-
-----CCCCCTGCTGTG
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCSCAAACCCYGCTTT
-GCCACGCCCCC----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCSCAAACCCYGCTTT
-GCCCCACCCA-----
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCSCAAACCCYGCTTT-
---GACCCCCCGCTGTG
 G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCSCAAACCCYGCTTT
AGCGGCACACACGCAA--
 A C G T A C G T G T A C A T G C A T C G G T A C C G T A G T C A C G T A A G T C A G T C A G T C A G C T A C T G A G T C A G C T A C G T C G A T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T