Information for 2-TGAGAATTAA (Motif 9)

A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
Reverse Opposite:
C G A T A C G T C T G A C G T A A C G T A C G T A T G C A C G T A T G C C G T A
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.35%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.2 +/- 25.9bp
Average Position of motif in Background47.6 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAX/MA0718.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGAGAATTAA-
-GCCAATTAAC
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A A C G T
A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

LMX1B/MA0703.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--TTAATTAA
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGAGAATTAA--
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PRRX1/MA0716.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--CTAATTAA
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--GCAATTAA
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A

MNX1/MA0707.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGAGAATTAA-
-GGTAATTAAA
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A A C G T
A C G T C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A

Dlx3/MA0880.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--CCAATTAC
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C

Prrx2/MA0075.2/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--CCAATTAA
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A

DLX6/MA0882.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGAGAATTAA
--CCAATTAC
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGAGAATTAA
--NCAATTAN
 A C G T A T C G C G T A T A C G C G T A C G T A A C G T A G C T C G T A C G T A
A C G T A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A