Information for 5-AGATGTTAATGCGGGA (Motif 14)

C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C T G A G T C C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C G T A G T C A C G T
p-value:1e-2
log p-value:-6.580e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGATGTTAATGCGGGA
AGGTGTTAAT------
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGATGTTAATGCGGGA
-TATGCWAATBAV---
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AGATGTTAATGCGGGA-
-------TATGCGGGTA
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGATGTTAATGCGGGA----
----NNNNATGCGGGTNNNN
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGATGTTAATGCGGGA
-WATGCAAATGAG---
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGATGTTAATGCGGGA
TCCAGATGTT---------
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGATGTTAATGCGGGA
AAGGTGTKAA-------
 A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTTAATGCGGGA
CATCCAGATGTTC--------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AGATGTTAATGCGGGA--
-------CATGCGGGTAC
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AGATGTTAATGCGGGA---
---------GGCGGGAARN
 C G T A A C T G C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C T G A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G