Information for 5-CTGGCGTGTGCCTGCT (Motif 9)

A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A C T G T G A C T C G A A T G C C G T A A G T C A C T G G A T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.563e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 27.5bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGGCGTGTGCCTGCT
-----CTGTTCCTGG-
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

XBP1/MA0844.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCGTGTGCCTGCT
GATGACGTGGCANT---
 A C G T A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGGCGTGTGCCTGCT
-TGGCACGTGCCA---
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGCGTGTGCCTGCT
-CGGCACGTGCCA---
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCGTGTGCCTGCT
NNGCGTGTGTGCNGCN-
 A C G T A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTGGCGTGTGCCTGCT
--TGCGTG--------
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGGCGTGTGCCTGCT
-TGACGT---------
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CTGGCGTGTGCCTGCT---
-------CCCCCTGCTGTG
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCGTGTGCCTGCT--
AACCGGTTNNAACCGGTTTN
 A C G T A C G T A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGGCGTGTGCCTGCT
--NNCGCGTGNN----
 A G T C A C G T A C T G C T A G A G T C C T A G A C G T A T C G A G C T A C T G A G T C A G T C C G A T A C T G A G T C A C G T
A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T