Information for 1-AACAGAGGGC (Motif 5)

T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
Reverse Opposite:
T C A G A G T C A T G C A G T C C G A T A G T C A C G T A C T G A G C T A G C T
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.845
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif403.8
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets50.0 +/- 25.1bp
Average Position of motif in Background50.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGC
AACAGATGGC
 T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGC
AACAGATGGT
 T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGC
AACAKATGGY
 T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGC
AACAAAGG--
 T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGGGC--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AACAGAGGGC--
AACAGATGGTCN
 T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C A C G T A C G T
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAGGGC--
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGGGC
GGAACAAAGR--
 A C G T A C G T T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACAGAGGGC
AAAACAAAGG--
 A C G T A C G T T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACAGAGGGC
GAACAATGGN-
 A C G T T C G A T C G A A G T C T G C A A C T G C G T A A C T G T A C G A C T G A G T C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T