Information for 9-CAGAGCCTAG (Motif 37)

A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
Reverse Opposite:
T G A C A G C T T C G A C T A G A C T G G T A C G C A T A G T C C G A T A T C G
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.824
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif497.6
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets60.0 +/- 25.1bp
Average Position of motif in Background50.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGAGCCTAG---
GATAACATCCTAGTAG
 A C G T A C G T A C G T A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGAGCCTAG
--CAGCC---
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-10
Orientation:forward strand
Alignment:----------CAGAGCCTAG
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGAGCCTAG
CGGAGC----
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGAGCCTAG
--AGGCCTAG
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAGCCTAG---
---TGCCCAGNHW
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGAGCCTAG
ATAATCCC--
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGCCTAG
ATGCCAGACN----
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CAGAGCCTAG
GRTGMTRGAGCC---
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGAGCCTAG
-CGTGCCAAG
 A T G C C G T A C T A G C G T A A C T G A G T C A G T C A G C T T C G A A C T G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G