Information for 17-CTCAACCATKGTC (Motif 35)

A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
Reverse Opposite:
A T C G T G C A T A G C T G A C T G C A A C G T A C T G C A T G A G C T C A G T A C T G C T G A A C T G
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.694
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets62.4 +/- 19.0bp
Average Position of motif in Background41.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCAACCATKGTC
-----CCTTTGTT
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTCAACCATKGTC--
-----CCATTGTTYB
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTCAACCATKGTC
----CTCATTGTC
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCAACCATKGTC-
----NCCATTGTTY
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTCAACCATKGTC--
-----CCATTGTTTT
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCAACCATKGTC
GGCTCYAKCAYC---
 A C G T A C G T A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCAACCATKGTC
-GCNGCCATCTTG
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCAACCATKGTC
-----CCWTTGTY
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTCAACCATKGTC----
--NNNCCATTGTGTNAN
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCAACCATKGTC
GTCCGCCATTA--
 A G T C A G C T T A G C G T C A T C G A G A T C A G T C G T C A A C G T A C T G A T C G A C G T A T G C
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T