Information for 17-GSCAGSTGCAGGTGCC (Motif 32)

A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
Reverse Opposite:
A T C G A C T G A G T C T G C A A T G C A G T C C A G T A C T G A T G C T G C A A T C G T G A C C G A T A C T G A T G C T G A C
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.654
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif302.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets46.1 +/- 28.0bp
Average Position of motif in Background48.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GSCAGSTGCAGGTGCC
CTCAGCAGCTGCTACTG--
 A C G T A C G T A C G T A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GSCAGSTGCAGGTGCC-
-----SDGCAGGTGCNS
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GSCAGSTGCAGGTGCC
GACAGGTGTN------
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GSCAGSTGCAGGTGCC
GACAGCTGCAG-----
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GSCAGSTGCAGGTGCC
NNVVCAGCTGBN------
 A C G T A C G T A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GSCAGSTGCAGGTGCC
NGNGACAGCTGCN------
 A C G T A C G T A C G T A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GSCAGSTGCAGGTGCC
NNCAGGTGCG------
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GSCAGSTGCAGGTGCC--
---AGATGCTRCTRCCHT
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GSCAGSTGCAGGTGCC
NNACAGCTGC-------
 A C G T A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GSCAGSTGCAGGTGCC
AACAGCTGCAG-----
 A C T G T A C G T A G C C G T A A C T G A T G C A C G T A T C G G T A C G T C A C T A G A T C G A C G T C T A G T G A C A T G C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T