Information for 5-TCCTTGACAA (Motif 27)

A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A G T C G T C A C G T A C T A G A T C G C G T A
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.873
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif74.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets56.8 +/- 18.6bp
Average Position of motif in Background52.6 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCCTTGACAA
---TTGACAG
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCCTTGACAA-
---TTGACAGG
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCCTTGACAA
--CTTGGCAA
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCCTTGACAA
--RHTGWCAR
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCTTGACAA-
---TTGACAGC
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCTTGACAA--
--GGTGCCAAGT
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCTTGACAA
-ARNTGACA-
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCTTGACAA--
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCTTGACAA-
--CGTGCCAAG
 A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCCTTGACAA-
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C T G G T C A G T A C C G T A C G T A A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A