Information for 8-GTTCCCTTTGTGT (Motif 22)

A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
Reverse Opposite:
C G T A T A G C G T C A G T A C C G T A C G T A C G T A A C T G A C T G A T C G T G C A C G T A A G T C
p-value:1e-9
log p-value:-2.172e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.5 +/- 28.5bp
Average Position of motif in Background51.4 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GTTCCCTTTGTGT
----CCTTTGTT-
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GTTCCCTTTGTGT-
----CCTTTGTTTT
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GTTCCCTTTGTGT
----CCWTTGTY-
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTCCCTTTGTGT----
-ANTCCTTTGTCTNNNN
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:GTTCCCTTTGTGT-
----CCWTTGTYYB
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCTTTGTGT
AGGVNCCTTTGT--
 A C G T A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCTTTGTGT---
TGTTCCCATTGTGTACT
 A C G T A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GTTCCCTTTGTGT
-----CTTTGT--
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTCCCTTTGTGT
CAGTTTCGNTTCTN-
 A C G T A C G T A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTTCCCTTTGTGT
CTGACCTTTG---
 A C T G A C G T A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A T C G C G A T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T