Information for 12-GKAGSCCAGGCYRAWG (Motif 21)

C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
Reverse Opposite:
A T G C C G A T A C G T A G C T C T G A A C T G A G T C A G T C A C G T C A T G A C T G T A C G A T G C A C G T G T A C A G T C
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 25.5bp
Average Position of motif in Background23.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GKAGSCCAGGCYRAWG
--TGCCCAGNHW----
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GKAGSCCAGGCYRAWG
-----CTAGGCCT---
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GKAGSCCAGGCYRAWG
-GAGSCCGAGC-----
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GKAGSCCAGGCYRAWG
AAGGKGRCGCAGGCA----
 A C G T A C G T A C G T C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GKAGSCCAGGCYRAWG----
------CAGGCCNNGGCCNN
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GKAGSCCAGGCYRAWG
-----CNAGGCCT---
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GKAGSCCAGGCYRAWG
--ATGCCAGACN----
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GKAGSCCAGGCYRAWG
TGACANARRCCAGRC-----
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GKAGSCCAGGCYRAWG
---NTCAAGGTCA---
 C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GKAGSCCAGGCYRAWG
NAAGGGGGCGTGGCTTN--
 A C G T A C G T A C G T C T A G A C T G C G T A A T C G A T G C A G T C G T A C C G T A A C T G A C T G A G T C A G C T C T G A C G T A C G T A A T C G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T