Information for 5-TGACATGCACSTC (Motif 14)

C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C
Reverse Opposite:
A T C G C G T A A T C G T A C G A G C T A T C G G T A C C T G A C A G T A T C G A G C T A T G C G C T A
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.712
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif308.7
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets43.3 +/- 23.2bp
Average Position of motif in Background50.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACATGCACSTC
TGACCTTGACCT-
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACATGCACSTC
TGACCTTGACCT-
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGACATGCACSTC
-----BGCACGTA
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGACATGCACSTC--
-----CGCACCTGCT
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGACATGCACSTC--
-----TACACCTGTC
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGACATGCACSTC-
------GCACGTAY
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGACATGCACSTC
GCTGACCTTGAACTN
 A C G T A C G T C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGACATGCACSTC-----
-NNTNCGCACCTGTNGAN
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGACATGCACSTC-
------GCACGTNC
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TGACATGCACSTC---
------KCACGTGMCN
 C G A T A T C G C T G A T A G C G T C A A G C T A C T G A T G C C T G A A T G C A T G C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T