Information for 4-AGTCATTGGCAGC (Motif 13)

C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
Reverse Opposite:
C T A G A T G C A C G T A C T G A G T C A G T C C G T A T C G A A C G T A C T G C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.492e+01
Information Content per bp:1.934
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.4 +/- 16.0bp
Average Position of motif in Background52.9 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTCATTGGCAGC--
CAATCACTGGCAGAAT
 A C G T C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
-BTGABTGACAGS
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGTCATTGGCAGC
-----TTGGCA--
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
---NNTTGGCANN
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
-NTGATTGACAGN
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
----NTTGGCANN
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTCATTGGCAGC-
--TGATTGGCTANN
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
----CTTGGCAA-
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTCATTGGCAGC-
--TGAGTGACAGSC
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTCATTGGCAGC
-CCGATTGGCT--
 C G T A A C T G A C G T A G T C G T C A A C G T A C G T C T A G A C T G A G T C C G T A A T C G A G T C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T