Information for 1-RARARGTARRRCC (Motif 1)

C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T A G C T A G T C A C G T G T C A A G T C A G T C A C G T A G T C A C G T A G T C
p-value:1e-14
log p-value:-3.292e+01
Information Content per bp:1.819
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 17.9bp
Average Position of motif in Background54.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RARARGTARRRCC
--CAGGTAAGTAT
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RARARGTARRRCC
ANGNAAAGGTCA----
 A C G T A C G T A C G T C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RARARGTARRRCC
-AAAAGTCAA---
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-RARARGTARRRCC
NNATAAGGNN----
 A C G T C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---RARARGTARRRCC
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:RARARGTARRRCC-
----GGAAANCCCC
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:RARARGTARRRCC-
----GGAAATCCCC
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:RARARGTARRRCC---
-NGNTCTAGAACCNGV
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C A C G T A C G T A C G T
A C G T C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:RARARGTARRRCC
NNGAGATAAGA--
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:RARARGTARRRCC
CGGAAGTGAAAC-
 C T A G C G T A C T A G C G T A C T A G A C T G A C G T C G T A C T A G C T G A C T G A A G T C A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T