Information for 3-CCAGGGGCTGTGGCGC (Motif 4)

A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C A C T G T A G C A T G C C G T A A G T C G C T A A T C G A G T C G T A C A G T C A G T C A C G T C T A G A C T G
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 23.1bp
Average Position of motif in Background17.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC
TCAGNGAGCGTGAC--
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCAGGGGCTGTGGCGC
---GGGGGTGTGTCC-
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC
--RGTGGGYGTGGC--
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T A C G T C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC
--GGGGGCGGGGCC--
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC
---GGGGGCGTGGC--
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T A C G T A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC
--AGTGGGCGTGGC--
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGGGCTGTGGCGC
NNCAGGTGCG-------
 A C G T A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCAGGGGCTGTGGCGC
-AGGGGGCGGGGCTG-
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCAGGGGCTGTGGCGC------
-----NNNNTTGGCGCCGANNN
 A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGGCTGTGGCGC
GTCCCCAGGGGA--------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G C A T G T C A G A T G C C G A T A C T G G C A T A T C G A T C G A G T C C T A G A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T