Information for 12-CAGGTGAGGGTCTCCA (Motif 25)

A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G C G T A C A T G C T G A A G T C A G T C A G T C A C G T A T G C C G T A G T A C A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.416e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.6 +/- 27.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGGTGAGGGTCTCCA
CAGGTGAGG-------
 A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGAGGGTCTCCA
NNCAGGTGNN--------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGAGGGTCTCCA
NNCAGGTGCG--------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGTGAGGGTCTCCA
-AGGTCAAGGTCA---
 A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGTGAGGGTCTCCA
VCAGGTRDRY-------
 A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGAGGGTCTCCA
NNCAGGTGTN--------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGTGAGGGTCTCCA
-AGGTCAAGGTCA---
 A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGAGGGTCTCCA
AACAGGTGT---------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGAGGGTCTCCA
GACAGGTGTN--------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGAGGGTCTCCA
AACAGGTGNT--------
 A C G T A C G T A G T C C G T A C T A G A C T G A C G T A T C G C G T A C T A G A C T G A C T G A G C T G T A C A C G T A G T C A G T C G T C A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T