Information for 2-GCCAGGGCAGCCACAG (Motif 2)

A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
Reverse Opposite:
A T G C A C G T A T C G A C G T C T A G A C T G A G T C A C G T A C T G A T G C A T G C A G T C C G A T A C T G A C T G T A G C
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.7 +/- 13.0bp
Average Position of motif in Background34.4 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGGGCAGCCACAG
TCCCAGMCRAGCCCC--
 A C G T A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GCCAGGGCAGCCACAG--
-------AAACCACAGAN
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCCAGGGCAGCCACAG-
-------AAACCACANN
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCCAGGGCAGCCACAG
------NAAACCACAG
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCCAGGGCAGCCACAG--
------NWAACCACADNN
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCCAGGGCAGCCACAG
AAGTTCAAGGTCAGC-----
 A C G T A C G T A C G T A C G T A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCCAGGGCAGCCACAG-
-------AAACCACAGC
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGGGCAGCCACAG
TTGCCATGGCAACN----
 A C G T A C G T A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCCAGGGCAGCCACAG
-------CAGCC----
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCCAGGGCAGCCACAG
-CAAGGHCANV-----
 A T C G A G T C G T A C C G T A A C T G A T C G A T C G G T A C C G T A A C T G A G T C A G T C C G T A A T G C C G T A A T C G
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T