Information for 5-CTGCTGGGCTGGA (Motif 19)

G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
Reverse Opposite:
A G C T A T G C A G T C C G T A C T A G G T A C A G T C A G T C C T G A A C T G A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.889
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets68.9 +/- 20.9bp
Average Position of motif in Background50.2 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGCTGGA
TNTCCTGCTGTGNNG--
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGCTGGA
TCNCCTGCTGNGNNN--
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGGCTGGA-
GGGGCTYGKCTGGGA
 A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CTGCTGGGCTGGA
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGCTGGA
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGGCTGGA
NNTCCTGCTGTGNNN--
 A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGGCTGGA
CCTGCTGAGH----
 A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGCTGGGCTGGA
WDNCTGGGCA---
 G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGGGCTGGA---
TATTATGGGATGGATAA
 A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGGCTGGA
NAACAGCTGG------
 A C G T A C G T A C G T G T A C C G A T A C T G A G T C A G C T A C T G A C T G A C T G A G T C A C G T A C T G A T C G C T G A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T