Information for 18-AATCTTGACCAAG (Motif 22)

G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C T G C G T A C G A T A C G T
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 19.6bp
Average Position of motif in Background59.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATCTTGACCAAG-
NGNTCTAGAACCNGV
 A C G T G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AATCTTGACCAAG-----
----TTGACCTANTTATN
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AATCTTGACCAAG--
-----TGACCTARTT
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATCTTGACCAAG
-----TGACCT--
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AATCTTGACCAAG--
NNGATCTAGAACCTNNN
 A C G T A C G T G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATCTTGACCAAG--
-----TGACCTTGAT
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AATCTTGACCAAG
TGACCTTGACCT--
 A C G T G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AATCTTGACCAAG-
BSNTGTTTACWYWGN
 A C G T G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AATCTTGACCAAG----
-NNCNTGACCCCGCTCT
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AATCTTGACCAAG
-ATATTTACATA-
 G T C A C G T A A C G T G T A C A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C T G
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T