Information for 13-TAAATAAGGGTCA (Motif 17)

A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T G T C A A C G T A C G T A C G T C G T A
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 23.1bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TAAATAAGGGTCA
---ATCAAGGTCA
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAAATAAGGGTCA----
-TCTCAAAGGTCACGAG
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TAAATAAGGGTCA
-----AGRGGTCA
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.64
Offset:7
Orientation:forward strand
Alignment:TAAATAAGGGTCA
-------AGGTCA
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAAATAAGGGTCA----
----CAAAGGTCAAGGG
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TAAATAAGGGTCA
-ANGNAAAGGTCA
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAAATAAGGGTCA----
-TCTCAAAGGTCACCTG
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAAATAAGGGTCA-----
-NTNNNGGGGTCANGNNN
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TAAATAAGGGTCA-
----TCAAGGTCAN
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAAATAAGGGTCA----
-AGAGCGGGGTCAAGTA
 A C G T G T C A C G T A C G T A A C G T G T C A C G T A A C T G C T A G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A