Information for 2-TTTGGAAATT (Motif 6)

A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
Reverse Opposite:
C G T A G T C A C G A T A G C T A C G T A G T C G T A C G T C A C T G A C T G A
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.849
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets51.0 +/- 24.4bp
Average Position of motif in Background53.1 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTGGAAATT
NNTGGAAANN
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTGGAAATT
AATGGAAAAT
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTGGAAATT
NATGGAAAAN
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTTGGAAATT---
---GGAAATTCCC
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTTGGAAATT
--TGGAAAA-
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTGGAAATT
AATGGAAAAT
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTTGGAAATT---
---GGAAATTCCC
 A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGAAATT---
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGAAATT
NATTGTGCAAT-
 A C G T A C G T A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTGGAAATT-
TTATGCAAATTA
 A C G T A G C T A G C T A C G T A C T G A C T G G T C A C T G A C G T A A C G T C G A T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A